Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKL65458.1 | AKL65459.1 | M444_08680 | M444_08685 | Hypothetical protein. | Luciferase. | 0.728 |
AKL65458.1 | AKL65460.1 | M444_08680 | M444_08690 | Hypothetical protein. | Aldo/keto reductase. | 0.681 |
AKL65458.1 | AKL65461.1 | M444_08680 | M444_08695 | Hypothetical protein. | Hypothetical protein. | 0.681 |
AKL65459.1 | AKL65458.1 | M444_08685 | M444_08680 | Luciferase. | Hypothetical protein. | 0.728 |
AKL65459.1 | AKL65460.1 | M444_08685 | M444_08690 | Luciferase. | Aldo/keto reductase. | 0.789 |
AKL65459.1 | AKL65461.1 | M444_08685 | M444_08695 | Luciferase. | Hypothetical protein. | 0.791 |
AKL65460.1 | AKL65458.1 | M444_08690 | M444_08680 | Aldo/keto reductase. | Hypothetical protein. | 0.681 |
AKL65460.1 | AKL65459.1 | M444_08690 | M444_08685 | Aldo/keto reductase. | Luciferase. | 0.789 |
AKL65460.1 | AKL65461.1 | M444_08690 | M444_08695 | Aldo/keto reductase. | Hypothetical protein. | 0.895 |
AKL65461.1 | AKL65458.1 | M444_08695 | M444_08680 | Hypothetical protein. | Hypothetical protein. | 0.681 |
AKL65461.1 | AKL65459.1 | M444_08695 | M444_08685 | Hypothetical protein. | Luciferase. | 0.791 |
AKL65461.1 | AKL65460.1 | M444_08695 | M444_08690 | Hypothetical protein. | Aldo/keto reductase. | 0.895 |
AKL65461.1 | AKL66746.1 | M444_08695 | M444_16540 | Hypothetical protein. | Hypothetical protein. | 0.455 |
AKL65461.1 | AKL66936.1 | M444_08695 | M444_17800 | Hypothetical protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.649 |
AKL65461.1 | AKL68216.1 | M444_08695 | M444_25455 | Hypothetical protein. | Recombinase RecA. | 0.447 |
AKL65461.1 | AKL70235.1 | M444_08695 | M444_22735 | Hypothetical protein. | ATP-dependent DNA helicase. | 0.919 |
AKL65461.1 | polA | M444_08695 | M444_10120 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.469 |
AKL65461.1 | ruvB | M444_08695 | M444_07930 | Hypothetical protein. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.443 |
AKL65461.1 | truB | M444_08695 | M444_25215 | Hypothetical protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.600 |
AKL66746.1 | AKL65461.1 | M444_16540 | M444_08695 | Hypothetical protein. | Hypothetical protein. | 0.455 |
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