Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKL65893.1 | AKL69912.1 | M444_11275 | M444_10075 | Arsenate reductase. | Tetratricopeptide repeat protein. | 0.716 |
AKL67277.1 | AKL68629.1 | M444_19925 | M444_27950 | Hypothetical protein. | Regulator. | 0.430 |
AKL67277.1 | AKL69912.1 | M444_19925 | M444_10075 | Hypothetical protein. | Tetratricopeptide repeat protein. | 0.406 |
AKL67854.1 | AKL69912.1 | M444_23290 | M444_10075 | Hypothetical protein. | Tetratricopeptide repeat protein. | 0.408 |
AKL68629.1 | AKL67277.1 | M444_27950 | M444_19925 | Regulator. | Hypothetical protein. | 0.430 |
AKL68629.1 | AKL69912.1 | M444_27950 | M444_10075 | Regulator. | Tetratricopeptide repeat protein. | 0.489 |
AKL68629.1 | AKL69958.1 | M444_27950 | M444_11905 | Regulator. | Hypothetical protein. | 0.434 |
AKL69912.1 | AKL65893.1 | M444_10075 | M444_11275 | Tetratricopeptide repeat protein. | Arsenate reductase. | 0.716 |
AKL69912.1 | AKL67277.1 | M444_10075 | M444_19925 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.406 |
AKL69912.1 | AKL67854.1 | M444_10075 | M444_23290 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.408 |
AKL69912.1 | AKL68629.1 | M444_10075 | M444_27950 | Tetratricopeptide repeat protein. | Regulator. | 0.489 |
AKL69912.1 | AKL69913.1 | M444_10075 | M444_10085 | Tetratricopeptide repeat protein. | Proteasome protein. | 0.730 |
AKL69912.1 | AKL69958.1 | M444_10075 | M444_11905 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.404 |
AKL69912.1 | coaE | M444_10075 | M444_10080 | Tetratricopeptide repeat protein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.763 |
AKL69912.1 | polA | M444_10075 | M444_10120 | Tetratricopeptide repeat protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.428 |
AKL69912.1 | ribBA | M444_10075 | M444_07365 | Tetratricopeptide repeat protein. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.402 |
AKL69912.1 | rpsA | M444_10075 | M444_10090 | Tetratricopeptide repeat protein. | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins. | 0.427 |
AKL69913.1 | AKL69912.1 | M444_10085 | M444_10075 | Proteasome protein. | Tetratricopeptide repeat protein. | 0.730 |
AKL69913.1 | coaE | M444_10085 | M444_10080 | Proteasome protein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.813 |
AKL69913.1 | rpsA | M444_10085 | M444_10090 | Proteasome protein. | 30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins. | 0.769 |
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