STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL70021.1Sugar ABC transporter substrate-binding protein. (438 aa)    
Predicted Functional Partners:
AKL66344.1
Sugar ABC transporter permease.
 
 0.998
AKL66343.1
ABC transporter permease.
 
 0.997
AKL66709.1
Sugar ABC transporter ATP-binding protein.
  
 0.945
AKL66342.1
Cell division protein FtsK.
 
     0.761
AKL65121.1
ABC transporter permease.
  
 
 0.588
AKL69983.1
Sugar ABC transporter permease.
  
 
 0.588
AKL69997.1
Sugar ABC transporter permease.
  
 
 0.588
AKL70313.1
Sugar ABC transporter permease.
  
 
 0.588
AKL69996.1
ABC transporter permease.
 
 
 0.584
AKL66345.1
Glycosyl transferase.
       0.567
Your Current Organism:
Streptomyces sp. Mg1
NCBI taxonomy Id: 465541
Other names: S. sp. Mg1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.