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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL66880.1Membrane protein. (215 aa)    
Predicted Functional Partners:
AKL65899.1
Hypothetical protein.
  
     0.767
AKL66882.1
ABC transporter.
       0.741
AKL66883.1
Membrane protein.
       0.735
AKL66884.1
ABC transporter.
       0.735
AKL66881.1
Membrane protein.
       0.655
AKL66885.1
Xaa-Pro aminopeptidase.
 
     0.620
AKL65940.1
Phenazine biosynthesis protein PhzC/PhzF.
  
     0.542
AKL66886.1
Short-chain dehydrogenase.
 
     0.517
AKL69028.1
Membrane protein.
  
     0.501
AKL68849.1
Hypothetical protein.
  
     0.499
Your Current Organism:
Streptomyces sp. Mg1
NCBI taxonomy Id: 465541
Other names: S. sp. Mg1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.