Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKL66880.1Membrane protein. (215 aa)    
Predicted Functional Partners:
AKL65899.1
Hypothetical protein.
  
     0.767
AKL66882.1
ABC transporter.
       0.666
AKL66883.1
Membrane protein.
       0.663
AKL66884.1
ABC transporter.
       0.663
AKL66881.1
Membrane protein.
       0.644
AKL66885.1
Xaa-Pro aminopeptidase.
 
     0.622
AKL65940.1
Phenazine biosynthesis protein PhzC/PhzF.
  
     0.542
AKL69028.1
Membrane protein.
  
     0.501
AKL68849.1
Hypothetical protein.
  
     0.499
AKL64819.1
ABC transporter.
  
     0.493
Your Current Organism:
Streptomyces sp. Mg1
NCBI taxonomy Id: 465541
Other names: S. sp. Mg1
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