Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKL68146.1LuxR family transcriptional regulator. (222 aa)    
Predicted Functional Partners:
AKL68147.1
Histidine kinase.
 
   0.974
AKL68148.1
Glycerophosphodiester phosphodiesterase.
     
 0.873
AKL68149.1
Adenosine deaminase.
       0.863
AKL70447.1
Hypothetical protein.
 
   0.801
AKL69240.1
Histidine kinase.
 
   0.801
AKL67227.1
Histidine kinase.
 
   0.794
AKL69126.1
Histidine kinase.
 
   0.794
AKL70141.1
Histidine kinase.
 
   0.791
AKL67627.1
Histidine kinase.
 
   0.788
AKL69488.1
ATPase.
 
   0.786
Your Current Organism:
Streptomyces sp. Mg1
NCBI taxonomy Id: 465541
Other names: S. sp. Mg1
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