STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN46365.1Hemolysin D; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (392 aa)    
Predicted Functional Partners:
AMN46364.1
Multidrug transporter.
 0.997
AMN47386.1
Multidrug transporter.
 0.989
AMN47385.1
Transporter.
 0.974
AMN47854.1
Multidrug transporter AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.954
AMN46363.1
Acriflavine resistance protein B; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.953
AMN46092.1
Hypothetical protein.
  
 0.944
AMN46043.1
Hypothetical protein.
  
 0.938
AMN48391.1
Hypothetical protein.
 
 0.744
AMN47945.1
RND transporter.
 
 0.738
AMN47106.1
RND transporter.
 
 0.728
Your Current Organism:
Steroidobacter denitrificans
NCBI taxonomy Id: 465721
Other names: DSM 18526, JCM 14622, S. denitrificans, Steroidobacter denitrificans Fahrbach et al. 2008, gamma proteobacterium FS-2007, strain FS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.