Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMN46374.1 | AMN46375.1 | ACG33_04480 | ACG33_04485 | Chemotaxis protein CheA. | Histidine kinase. | 0.995 |
AMN46374.1 | AMN46376.1 | ACG33_04480 | ACG33_04490 | Chemotaxis protein CheA. | Chemotaxis protein CheW. | 0.997 |
AMN46374.1 | AMN46377.1 | ACG33_04480 | ACG33_04495 | Chemotaxis protein CheA. | Hypothetical protein. | 0.994 |
AMN46374.1 | AMN46379.1 | ACG33_04480 | ACG33_04505 | Chemotaxis protein CheA. | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.930 |
AMN46374.1 | AMN46626.1 | ACG33_04480 | ACG33_05845 | Chemotaxis protein CheA. | Hypothetical protein. | 0.989 |
AMN46374.1 | AMN46628.1 | ACG33_04480 | ACG33_05855 | Chemotaxis protein CheA. | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.867 |
AMN46374.1 | AMN47962.1 | ACG33_04480 | ACG33_12815 | Chemotaxis protein CheA. | Hypothetical protein. | 0.979 |
AMN46374.1 | AMN47964.1 | ACG33_04480 | ACG33_12825 | Chemotaxis protein CheA. | Histidine kinase. | 0.987 |
AMN46374.1 | cheB | ACG33_04480 | ACG33_05865 | Chemotaxis protein CheA. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.992 |
AMN46374.1 | cheB-2 | ACG33_04480 | ACG33_12800 | Chemotaxis protein CheA. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.992 |
AMN46375.1 | AMN46374.1 | ACG33_04485 | ACG33_04480 | Histidine kinase. | Chemotaxis protein CheA. | 0.995 |
AMN46375.1 | AMN46376.1 | ACG33_04485 | ACG33_04490 | Histidine kinase. | Chemotaxis protein CheW. | 0.994 |
AMN46375.1 | AMN46377.1 | ACG33_04485 | ACG33_04495 | Histidine kinase. | Hypothetical protein. | 0.814 |
AMN46375.1 | AMN46379.1 | ACG33_04485 | ACG33_04505 | Histidine kinase. | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.991 |
AMN46375.1 | AMN46628.1 | ACG33_04485 | ACG33_05855 | Histidine kinase. | Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.983 |
AMN46375.1 | cheB | ACG33_04485 | ACG33_05865 | Histidine kinase. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.983 |
AMN46375.1 | cheB-2 | ACG33_04485 | ACG33_12800 | Histidine kinase. | Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.984 |
AMN46376.1 | AMN46374.1 | ACG33_04490 | ACG33_04480 | Chemotaxis protein CheW. | Chemotaxis protein CheA. | 0.997 |
AMN46376.1 | AMN46375.1 | ACG33_04490 | ACG33_04485 | Chemotaxis protein CheW. | Histidine kinase. | 0.994 |
AMN46376.1 | AMN46377.1 | ACG33_04490 | ACG33_04495 | Chemotaxis protein CheW. | Hypothetical protein. | 0.994 |
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