STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN46434.1Cell wall biogenesis protein; Belongs to the DegT/DnrJ/EryC1 family. (379 aa)    
Predicted Functional Partners:
AMN46439.1
Hypothetical protein.
  
 0.841
AMN47224.1
UDP-N-acetyl-D-glucosamine dehydrogenase.
  
 0.762
AMN46438.1
Sugar transferase.
  
 0.761
AMN46435.1
dTDP-6-deoxy-L-hexose 3-O-methyltransferase.
       0.737
AMN46433.1
Putative methyltransferase.
  
  
 0.623
AMN46437.1
Transketolase.
  
    0.622
AMN46417.1
UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase.
 
  
 0.557
cpsB
Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.531
AMN46436.1
Transketolase.
       0.520
AMN46913.1
Dehydrogenase.
  
  
 0.512
Your Current Organism:
Steroidobacter denitrificans
NCBI taxonomy Id: 465721
Other names: DSM 18526, JCM 14622, S. denitrificans, Steroidobacter denitrificans Fahrbach et al. 2008, gamma proteobacterium FS-2007, strain FS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.