STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN46983.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
AMN46982.1
Hypothetical protein.
 
 
 0.996
AMN46984.1
Hypothetical protein.
 
 
 0.996
AMN46985.1
General secretion pathway protein H.
 
 
 0.992
AMN46986.1
General secretion pathway protein G.
 
 
 0.987
AMN46980.1
Hypothetical protein.
 
  
 0.919
AMN46981.1
General secretion pathway protein L.
 
   
 0.918
AMN47217.1
Hypothetical protein.
 
  
 0.908
AMN47216.1
General secretion pathway protein C.
 
  
 0.878
AMN46979.1
General secretion pathway protein N.
 
   
 0.865
AMN46987.1
Hypothetical protein.
 
     0.848
Your Current Organism:
Steroidobacter denitrificans
NCBI taxonomy Id: 465721
Other names: DSM 18526, JCM 14622, S. denitrificans, Steroidobacter denitrificans Fahrbach et al. 2008, gamma proteobacterium FS-2007, strain FS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.