STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN47224.1UDP-N-acetyl-D-glucosamine dehydrogenase. (334 aa)    
Predicted Functional Partners:
AMN46412.1
UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.924
AMN46418.1
UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase.
    
 0.906
AMN46434.1
Cell wall biogenesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.762
lpxB
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
     0.664
AMN46467.1
Aminotransferase DegT; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.611
AMN47225.1
Hypothetical protein.
       0.565
lysS
lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.549
AMN46249.1
Hypothetical protein.
   
 
 0.469
AMN47870.1
Hypothetical protein.
   
 
 0.469
AMN45881.1
Adenosine kinase.
  
  
 0.414
Your Current Organism:
Steroidobacter denitrificans
NCBI taxonomy Id: 465721
Other names: DSM 18526, JCM 14622, S. denitrificans, Steroidobacter denitrificans Fahrbach et al. 2008, gamma proteobacterium FS-2007, strain FS
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.