STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN47466.1Hypothetical protein. (987 aa)    
Predicted Functional Partners:
AMN47469.1
Hypothetical protein.
 
   
 0.948
AMN47467.1
Hypothetical protein.
 
     0.945
AMN47470.1
Hypothetical protein.
 
   
 0.934
AMN47468.1
Fis family transcriptional regulator.
 
 
 
 0.922
AMN47465.1
Polysaccharide export outer membrane protein.
 
  
 0.898
AMN47464.1
Hypothetical protein.
 
     0.880
AMN47461.1
Polysaccharide deacetylase.
 
   
 0.845
AMN47463.1
Hypothetical protein.
 
   
 0.822
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.813
AMN47458.1
phenylacetate-CoA ligase.
 
     0.728
Your Current Organism:
Steroidobacter denitrificans
NCBI taxonomy Id: 465721
Other names: DSM 18526, JCM 14622, S. denitrificans, Steroidobacter denitrificans Fahrbach et al. 2008, gamma proteobacterium FS-2007, strain FS
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