Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMN47458.1 | AMN47461.1 | ACG33_10160 | ACG33_10175 | phenylacetate-CoA ligase. | Polysaccharide deacetylase. | 0.788 |
AMN47458.1 | AMN47463.1 | ACG33_10160 | ACG33_10185 | phenylacetate-CoA ligase. | Hypothetical protein. | 0.599 |
AMN47458.1 | AMN47464.1 | ACG33_10160 | ACG33_10190 | phenylacetate-CoA ligase. | Hypothetical protein. | 0.721 |
AMN47458.1 | AMN47465.1 | ACG33_10160 | ACG33_10195 | phenylacetate-CoA ligase. | Polysaccharide export outer membrane protein. | 0.556 |
AMN47458.1 | AMN47466.1 | ACG33_10160 | ACG33_10200 | phenylacetate-CoA ligase. | Hypothetical protein. | 0.728 |
AMN47458.1 | AMN47467.1 | ACG33_10160 | ACG33_10205 | phenylacetate-CoA ligase. | Hypothetical protein. | 0.727 |
AMN47458.1 | AMN47468.1 | ACG33_10160 | ACG33_10210 | phenylacetate-CoA ligase. | Fis family transcriptional regulator. | 0.415 |
AMN47458.1 | AMN47469.1 | ACG33_10160 | ACG33_10215 | phenylacetate-CoA ligase. | Hypothetical protein. | 0.722 |
AMN47458.1 | AMN47470.1 | ACG33_10160 | ACG33_10220 | phenylacetate-CoA ligase. | Hypothetical protein. | 0.544 |
AMN47461.1 | AMN47458.1 | ACG33_10175 | ACG33_10160 | Polysaccharide deacetylase. | phenylacetate-CoA ligase. | 0.788 |
AMN47461.1 | AMN47463.1 | ACG33_10175 | ACG33_10185 | Polysaccharide deacetylase. | Hypothetical protein. | 0.919 |
AMN47461.1 | AMN47464.1 | ACG33_10175 | ACG33_10190 | Polysaccharide deacetylase. | Hypothetical protein. | 0.874 |
AMN47461.1 | AMN47465.1 | ACG33_10175 | ACG33_10195 | Polysaccharide deacetylase. | Polysaccharide export outer membrane protein. | 0.849 |
AMN47461.1 | AMN47466.1 | ACG33_10175 | ACG33_10200 | Polysaccharide deacetylase. | Hypothetical protein. | 0.845 |
AMN47461.1 | AMN47467.1 | ACG33_10175 | ACG33_10205 | Polysaccharide deacetylase. | Hypothetical protein. | 0.846 |
AMN47461.1 | AMN47468.1 | ACG33_10175 | ACG33_10210 | Polysaccharide deacetylase. | Fis family transcriptional regulator. | 0.667 |
AMN47461.1 | AMN47469.1 | ACG33_10175 | ACG33_10215 | Polysaccharide deacetylase. | Hypothetical protein. | 0.819 |
AMN47461.1 | AMN47470.1 | ACG33_10175 | ACG33_10220 | Polysaccharide deacetylase. | Hypothetical protein. | 0.805 |
AMN47463.1 | AMN47458.1 | ACG33_10185 | ACG33_10160 | Hypothetical protein. | phenylacetate-CoA ligase. | 0.599 |
AMN47463.1 | AMN47461.1 | ACG33_10185 | ACG33_10175 | Hypothetical protein. | Polysaccharide deacetylase. | 0.919 |
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