Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMN45782.1 | AMN47797.1 | ACG33_01400 | ACG33_11955 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.647 |
AMN46275.1 | AMN47797.1 | ACG33_03965 | ACG33_11955 | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.600 |
AMN47796.1 | AMN47797.1 | ACG33_11950 | ACG33_11955 | Hypothetical protein. | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.550 |
AMN47796.1 | AMN47798.1 | ACG33_11950 | ACG33_11960 | Hypothetical protein. | 23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.462 |
AMN47797.1 | AMN45782.1 | ACG33_11955 | ACG33_01400 | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.647 |
AMN47797.1 | AMN46275.1 | ACG33_11955 | ACG33_03965 | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.600 |
AMN47797.1 | AMN47796.1 | ACG33_11955 | ACG33_11950 | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Hypothetical protein. | 0.550 |
AMN47797.1 | AMN47798.1 | ACG33_11955 | ACG33_11960 | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.887 |
AMN47797.1 | AMN48138.1 | ACG33_11955 | ACG33_13725 | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Copper oxidase. | 0.404 |
AMN47797.1 | AMN48327.1 | ACG33_11955 | ACG33_14730 | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Ammonia channel protein. | 0.505 |
AMN47797.1 | bamD | ACG33_11955 | ACG33_11965 | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.466 |
AMN47797.1 | hisD | ACG33_11955 | ACG33_07645 | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.417 |
AMN47797.1 | murD | ACG33_11955 | ACG33_01685 | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.439 |
AMN47798.1 | AMN47796.1 | ACG33_11960 | ACG33_11950 | 23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein. | 0.462 |
AMN47798.1 | AMN47797.1 | ACG33_11960 | ACG33_11955 | 23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.887 |
AMN47798.1 | bamD | ACG33_11960 | ACG33_11965 | 23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.651 |
AMN48138.1 | AMN47797.1 | ACG33_13725 | ACG33_11955 | Copper oxidase. | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.404 |
AMN48327.1 | AMN47797.1 | ACG33_14730 | ACG33_11955 | Ammonia channel protein. | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.505 |
bamD | AMN47797.1 | ACG33_11965 | ACG33_11955 | Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family. | 0.466 |
bamD | AMN47798.1 | ACG33_11965 | ACG33_11960 | Hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.651 |
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