STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN48010.1HipA domain protein. (418 aa)    
Predicted Functional Partners:
AMN48009.1
XRE family transcriptional regulator.
 
   0.961
AMN45744.1
Hypothetical protein.
 
   0.830
AMN48008.1
DNA-binding protein.
 
   0.809
AMN47839.1
Hypothetical protein.
 
   0.775
AMN46592.1
Serine/threonine-protein kinase HipA.
 
   
 0.706
AMN48011.1
Hypothetical protein.
  
    0.549
AMN45966.1
Hypothetical protein.
   
 
 0.521
AMN48152.1
Transcriptional regulator.
   
 
 0.521
Your Current Organism:
Steroidobacter denitrificans
NCBI taxonomy Id: 465721
Other names: DSM 18526, JCM 14622, S. denitrificans, Steroidobacter denitrificans Fahrbach et al. 2008, gamma proteobacterium FS-2007, strain FS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.