STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMN48053.1Chemotaxis protein CheY. (225 aa)    
Predicted Functional Partners:
AMN48054.1
Hypothetical protein.
 
 
 0.964
AMN47974.1
Hypothetical protein.
 
0.902
AMN48050.1
Two-component system, OmpR family, sensor histidine kinase QseC.
 
 0.882
AMN47982.1
Hypothetical protein.
 
 0.852
AMN47977.1
Hypothetical protein.
 
 0.850
AMN46081.1
Hypothetical protein.
 
 
 0.844
AMN48059.1
Histidine kinase.
 
 
 0.841
AMN48005.1
Hypothetical protein.
 
 
 0.834
AMN48066.1
Two-component system, OmpR family, heavy metal sensor histidine kinase CusS; Member of a two-component regulatory system.
 
 0.786
AMN47620.1
Hypothetical protein.
 
 0.767
Your Current Organism:
Steroidobacter denitrificans
NCBI taxonomy Id: 465721
Other names: DSM 18526, JCM 14622, S. denitrificans, Steroidobacter denitrificans Fahrbach et al. 2008, gamma proteobacterium FS-2007, strain FS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.