Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMN46658.1 | AMN48305.1 | ACG33_06110 | ACG33_14595 | Hypothetical protein; Belongs to the UPF0149 family. | Hypothetical protein. | 0.411 |
AMN47031.1 | AMN48305.1 | ACG33_07960 | ACG33_14595 | Hypothetical protein. | Hypothetical protein. | 0.401 |
AMN47311.1 | AMN48305.1 | ACG33_09430 | ACG33_14595 | Fumarate reductase, membrane anchor subunit. | Hypothetical protein. | 0.491 |
AMN47815.1 | AMN47816.1 | ACG33_12045 | ACG33_12050 | Serine protease. | Membrane protein. | 0.931 |
AMN47815.1 | AMN48305.1 | ACG33_12045 | ACG33_14595 | Serine protease. | Hypothetical protein. | 0.533 |
AMN47816.1 | AMN47815.1 | ACG33_12050 | ACG33_12045 | Membrane protein. | Serine protease. | 0.931 |
AMN47816.1 | AMN48305.1 | ACG33_12050 | ACG33_14595 | Membrane protein. | Hypothetical protein. | 0.435 |
AMN48305.1 | AMN46658.1 | ACG33_14595 | ACG33_06110 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0149 family. | 0.411 |
AMN48305.1 | AMN47031.1 | ACG33_14595 | ACG33_07960 | Hypothetical protein. | Hypothetical protein. | 0.401 |
AMN48305.1 | AMN47311.1 | ACG33_14595 | ACG33_09430 | Hypothetical protein. | Fumarate reductase, membrane anchor subunit. | 0.491 |
AMN48305.1 | AMN47815.1 | ACG33_14595 | ACG33_12045 | Hypothetical protein. | Serine protease. | 0.533 |
AMN48305.1 | AMN47816.1 | ACG33_14595 | ACG33_12050 | Hypothetical protein. | Membrane protein. | 0.435 |
AMN48305.1 | cobS | ACG33_14595 | ACG33_15140 | Hypothetical protein. | adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.797 |
AMN48305.1 | gidA | ACG33_14595 | ACG33_14600 | Hypothetical protein. | tRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.457 |
cobS | AMN48305.1 | ACG33_15140 | ACG33_14595 | adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | Hypothetical protein. | 0.797 |
gidA | AMN48305.1 | ACG33_14600 | ACG33_14595 | tRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Hypothetical protein. | 0.457 |