Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
cpxASensory kinase in two-component regulatory system with CpxR; silverDB:etchr00093. (459 aa)    
Predicted Functional Partners:
cpxR
Two-component response regulator; silverDB:etchr00094.
 
 0.999
ETA_10950
Two-component system response regulator; silverDB:etchr01086.
 
 
 0.905
phoP
Two-component response regulator of virulence determinants; silverDB:etchr01959.
 
 
 0.833
arcB
Aerobic respiration control sensor protein ArcB; silverDB:etchr00308.
 
 
0.830
rstA
Response regulator in two-component regulatory system with RstB; silverDB:etchr01668.
 
 
 0.808
baeR
Two-component system response regulator; silverDB:etchr01297.
 
 
 0.804
ompR
Transcriptional regulatory protein OmpR; silverDB:etchr03205.
 
 
 0.786
arcA
Two-component system, OmpR family, aerobic respiration control protein ArcA; silverDB:etchr00688.
 
 
 0.777
pmrA
Two-component system response regulator; silverDB:etchr00335.
 
 
 0.772
cspR
rRNA methyltransferase CspR (SpoU class); Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.
       0.732
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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