STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yiiQConserved hypothetical protein YiiQ; silverDB:etchr00106. (197 aa)    
Predicted Functional Partners:
nlpB
Lipoprotein-34; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
     0.772
yecF
Conserved hypothetical protein YecF; silverDB:etchr02067.
  
     0.772
yacC
Hypothetical protein; silverDB:etchr00823.
  
     0.770
ETA_21780
Conserved hypothetical protein; silverDB:etchr02166.
  
     0.764
yciC
Conserved hypothetical protein YciC; silverDB:etchr01586.
  
     0.762
ETA_16810
Conserved hypothetical protein (DUF1471); silverDB:etchr01671.
  
     0.759
ETA_12640
Conserved hypothetical protein; silverDB:etchr01254.
  
     0.758
atpI
ATP synthase protein I; silverDB:etchr03467.
  
     0.758
cpxP
Periplasmic repressor of cpx regulon by interaction with CpxA; silverDB:etchr00095.
  
     0.753
ompX
Virulence-related outer membrane protein X; silverDB:etchr02191.
  
     0.752
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.