Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yhcMHypothetical protein YhcM; Reduces the stability of FtsZ polymers in the presence of ATP. (375 aa)    
Predicted Functional Partners:
yhcB
Putative periplasmic protein; silverDB:etchr00300.
       0.811
sdhB
Succinate dehydrogenase, iron sulfur protein; silverDB:etchr02293; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
    0.742
sdhC
Succinate dehydrogenase cytochrome b-556 subunit; silverDB:etchr02296.
 
   
 0.709
sdhA
Succinate dehydrogenase flavoprotein subunit; silverDB:etchr02294; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
 
    0.701
rpsI
30S ribosomal protein S9; silverDB:etchr00303; Belongs to the universal ribosomal protein uS9 family.
  
   0.663
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
    0.527
sspB
Stringent starvation protein B; silverDB:etchr00305.
 
     0.448
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
 
     0.443
degQ
Exported protease; silverDB:etchr00299; Belongs to the peptidase S1C family.
       0.436
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
 
    0.432
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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