sspA protein (Erwinia tasmaniensis) - STRING interaction network

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Score

sspA

Stringent starvation protein A; silverDB:etchr00304; Belongs to the GST superfamily. (213 aa)

Predicted Functional Partners:

sspB

0.996

rpoD

0.928

rpoZ

0.927

rpoC

0.927

rpoA

0.906

rpoB

0.900

rplM

0.662

rpsI

0.654

lysS

0.589

orn

0.541

Your Current Organism:

Erwinia tasmaniensis

NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
lysS	rplM	ETA_27820	ETA_03030	Lysyl tRNA synthetase; silverDB:etchr02770; Belongs to the class-II aminoacyl-tRNA synthetase family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.543
lysS	rpoA	ETA_27820	ETA_31380	Lysyl tRNA synthetase; silverDB:etchr02770; Belongs to the class-II aminoacyl-tRNA synthetase family.	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.474
lysS	rpoB	ETA_27820	ETA_01550	Lysyl tRNA synthetase; silverDB:etchr02770; Belongs to the class-II aminoacyl-tRNA synthetase family.	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.541
lysS	rpoC	ETA_27820	ETA_01560	Lysyl tRNA synthetase; silverDB:etchr02770; Belongs to the class-II aminoacyl-tRNA synthetase family.	DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.439
lysS	rpoD	ETA_27820	ETA_04150	Lysyl tRNA synthetase; silverDB:etchr02770; Belongs to the class-II aminoacyl-tRNA synthetase family.	Sigma D (Sigma 70) factor of RNA polymerase; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.417
lysS	rpsI	ETA_27820	ETA_03040	Lysyl tRNA synthetase; silverDB:etchr02770; Belongs to the class-II aminoacyl-tRNA synthetase family.	30S ribosomal protein S9; silverDB:etchr00303; Belongs to the universal ribosomal protein uS9 family.	0.415
lysS	sspA	ETA_27820	ETA_03050	Lysyl tRNA synthetase; silverDB:etchr02770; Belongs to the class-II aminoacyl-tRNA synthetase family.	Stringent starvation protein A; silverDB:etchr00304; Belongs to the GST superfamily.	0.589
orn	rpoZ	ETA_29730	ETA_00420	Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.	DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.582
orn	sspA	ETA_29730	ETA_03050	Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.	Stringent starvation protein A; silverDB:etchr00304; Belongs to the GST superfamily.	0.541
rplM	lysS	ETA_03030	ETA_27820	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Lysyl tRNA synthetase; silverDB:etchr02770; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.543
rplM	rpoA	ETA_03030	ETA_31380	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.965
rplM	rpoB	ETA_03030	ETA_01550	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.965
rplM	rpoC	ETA_03030	ETA_01560	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.717
rplM	rpoZ	ETA_03030	ETA_00420	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.861
rplM	rpsI	ETA_03030	ETA_03040	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S9; silverDB:etchr00303; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	sspA	ETA_03030	ETA_03050	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Stringent starvation protein A; silverDB:etchr00304; Belongs to the GST superfamily.	0.662
rplM	sspB	ETA_03030	ETA_03060	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Stringent starvation protein B; silverDB:etchr00305.	0.597
rpoA	lysS	ETA_31380	ETA_27820	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Lysyl tRNA synthetase; silverDB:etchr02770; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.474
rpoA	rplM	ETA_31380	ETA_03030	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.965
rpoA	rpoB	ETA_31380	ETA_01550	DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999