Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arcBAerobic respiration control sensor protein ArcB; silverDB:etchr00308. (779 aa)    
Predicted Functional Partners:
barA
Signal transduction histidine-protein kinase BarA; silverDB:etchr02713.
 
 
0.998
rcsC
Sensor kinase protein (Capsular synthesis regulator component C); Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.
 
 
0.997
arcA
Two-component system, OmpR family, aerobic respiration control protein ArcA; silverDB:etchr00688.
 
 0.995
ETA_19840
Putative chemotaxis signal transduction protein; silverDB:etchr01973.
  
 
 0.994
yegE
Putative sensor-type protein YegE; silverDB:etchr01305.
 
 
 0.988
ETA_08470
Transcriptional regulatory protein, LuxR; silverDB:etchr00838.
  
 
 0.986
ETA_30620
Putative sensory box protein; silverDB:etchr03049.
  
 
 0.986
hrcQ
HrcQ protein (hrp cluster); silverDB:etchr00516.
  
 
 0.985
hrpX
HrpX protein (hrp cluster); silverDB:etchr00524.
  
 
 0.978
ETA_07660
Probable methyl-accepting chemotaxis protein; silverDB:etchr00757.
 
 
 0.971
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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