STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yrbEABC transporter, permease subunit, probable toluene tolerance protein; silverDB:etchr00322. (260 aa)    
Predicted Functional Partners:
ETA_03220
ABC transporter, ATP-binding protein; silverDB:etchr00321.
 
 0.999
ETA_03240
Putative membrane protein; silverDB:etchr00323.
 
 0.999
ETA_03260
Anti-sigma B factor antagonist; silverDB:etchr00325.
  
 0.991
yrbC
Putative ABC superfamily transport protein; silverDB:etchr00324.
 
 
 0.989
yebT
Conserved hypothetical protein YebT; silverDB:etchr01502.
  
 
 0.778
yhbG
Putative ABC superfamily transport protein; silverDB:etchr00315.
 
  
  0.746
vacJ
Lipoprotein; silverDB:etchr01137.
 
   
 0.712
yrbH
Putative isomerase; silverDB:etchr00319.
 
     0.705
ETA_03080
Glutamate synthase (NADPH); silverDB:etchr00307.
       0.632
ETA_03210
Sodium/calcium exchanger protein; silverDB:etchr00320.
       0.566
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.