close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmrBTwo-component system sensor protein; silverDB:etchr00334. (351 aa)    
Predicted Functional Partners:
pmrA
Two-component system response regulator; silverDB:etchr00335.
 
 0.998
arcB
Aerobic respiration control sensor protein ArcB; silverDB:etchr00308.
 
 
 0.912
ETA_03370
Penicillin-binding protein 4 precursor; silverDB:etchr00336.
  
    0.877
phoP
Two-component response regulator of virulence determinants; silverDB:etchr01959.
 
 
 0.852
baeR
Two-component system response regulator; silverDB:etchr01297.
 
 
 0.828
cpxR
Two-component response regulator; silverDB:etchr00094.
 
 
 0.825
barA
Signal transduction histidine-protein kinase BarA; silverDB:etchr02713.
 
 
0.825
ETA_10950
Two-component system response regulator; silverDB:etchr01086.
 
 
 0.813
ETA_23200
Putative transcriptional regulator; silverDB:etchr02308.
 
 
 0.785
rstA
Response regulator in two-component regulatory system with RstB; silverDB:etchr01668.
 
 
 0.775
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.