STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmrATwo-component system response regulator; silverDB:etchr00335. (220 aa)    
Predicted Functional Partners:
pmrB
Two-component system sensor protein; silverDB:etchr00334.
 
 0.998
barA
Signal transduction histidine-protein kinase BarA; silverDB:etchr02713.
 
 
 0.926
arcB
Aerobic respiration control sensor protein ArcB; silverDB:etchr00308.
  
 
 0.892
ETA_03370
Penicillin-binding protein 4 precursor; silverDB:etchr00336.
  
  
 0.885
tRNA-Arg
tRNA-Arg; tRNAscan-SE-score 69.56.
 
 
 0.799
cpxA
Sensory kinase in two-component regulatory system with CpxR; silverDB:etchr00093.
 
 
 0.772
phoQ
Virulence sensor histidine kinase; silverDB:etchr01960.
 
 0.747
ETA_10960
Putative two-component system sensor kinase; silverDB:etchr01087.
 
 
 0.738
rstB
Two-component regulatory system, sensor kinase; silverDB:etchr01667.
 
 
 0.729
baeS
Sensor protein; silverDB:etchr01298.
 
 
 0.702
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.