STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_03820Hypothetical protein; silverDB:etchr00382. (93 aa)    
Predicted Functional Partners:
barA
Signal transduction histidine-protein kinase BarA; silverDB:etchr02713.
  
 
 0.949
arcB
Aerobic respiration control sensor protein ArcB; silverDB:etchr00308.
  
 
 0.813
ETA_03810
Probable transposase, fragment; silverDB:etchr00381.
       0.768
hrpX
HrpX protein (hrp cluster); silverDB:etchr00524.
  
 
 0.677
ETA_03800
Hypothetical protein; silverDB:etchr00380.
       0.618
ETA_03830
Putative pili assembly chaperone; silverDB:etchr00383.
  
    0.536
ETA_03850
Putative outer membrane usher protein; silverDB:etchr00385.
  
    0.535
ETA_03840
Conserved hypothetical protein; silverDB:etchr00384.
       0.532
ETA_03860
Pili assembly chaperone precursor; silverDB:etchr00386.
  
    0.504
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
    
 
 0.441
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.