Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mrfC-2Outer membrane platform usher (mannose-resistance fimbriae), MrfC protein; silverDB:etchr00403. (846 aa)    
Predicted Functional Partners:
mrfB-2
Fimbrial anchor (mannose-resistance fimbriae), MrfB protein; silverDB:etchr00404.
 
   0.964
mrfD-2
Periplasmatic chaperonin (mannose-resistance fimbriae), MrfD protein; silverDB:etchr00402.
 
   0.937
mrfA
Major fimbrial subunit (mannose-resistance fimbriae), MrfA protein; silverDB:etchr00405.
 
   0.934
faeE
Outer membrane usher protein; silverDB:etchr00159.
  
   0.858
mrfD
MrfD protein; silverDB:etchr00261.
  
   0.858
pmfD
Chaperone protein PmfD; silverDB:etchr03006.
  
   0.858
mrkB
Chaperone protein (involved in the expression of type III fimbriae) MrkB; silverDB:etchr02841.
  
   0.853
ETA_28560
Probable pili assembly chaperone; silverDB:etchr02844.
  
   0.853
ETA_02590
Major MR/P fimbria protein; silverDB:etchr00258.
  
   0.852
ETA_28800
Fimbrial chaperone; silverDB:etchr02868.
  
   0.852
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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