Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
nlpALipoprotein 28 precursor; silverDB:etchr00408; Belongs to the nlpA lipoprotein family. (271 aa)    
Predicted Functional Partners:
metI
D-methionine transport system permease protein; silverDB:etchr00910.
 0.996
metN
D-methionine transport ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.989
metQ
D-methionine-binding lipoprotein MetQ; silverDB:etchr00909; Belongs to the nlpA lipoprotein family.
  
  
 
0.902
ETA_04090
Putative transcriptional regulator; silverDB:etchr00409.
       0.565
metF
5,10 methylenetetrahydrofolate reductase; silverDB:etchr00128; Belongs to the methylenetetrahydrofolate reductase family.
  
  
 0.485
metK
S-adenosylmethionine synthetase (Methionine adenosyltransferase); Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
   
  
 0.450
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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