STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dkgA2,5-diketo-D-gluconic acid reductase A; silverDB:etchr00444. (274 aa)    
Predicted Functional Partners:
yqhC
Putative ARAC-type regulatory protein; silverDB:etchr00445.
     
 0.673
ETA_15550
PrkA serine kinase; silverDB:etchr01545.
   
    0.616
tkrA
2-ketogluconate reductase; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrB subfamily.
  
 0.565
ETA_13130
Probable oxidoreductase; silverDB:etchr01303.
 
 
 0.557
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
  
 
 0.527
tas
Putative aldo/keto reductase-family protein; silverDB:etchr02754.
  
 
 0.494
ETA_22680
Putative zinc-binding dehydrogenase; silverDB:etchr02256.
   
 
 0.477
otsB
Trehalose phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.473
yqjD
Conserved hypothetical protein YqjD; silverDB:etchr02896.
   
    0.461
ydiZ
Putative cytoplasmic protein YdiZ; silverDB:etchr01832.
   
    0.459
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.