Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yqhCPutative ARAC-type regulatory protein; silverDB:etchr00445. (295 aa)    
Predicted Functional Partners:
dkgA
2,5-diketo-D-gluconic acid reductase A; silverDB:etchr00444.
     
 0.655
araC
Arabinose operon regulatory protein; silverDB:etchr01756.
  
   
 0.616
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
     
 0.584
dat
Diaminobutyrate-2-oxoglutarate aminotransferase; silverDB:etchr00446; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.479
ddc
L-2,4-diaminobutyrate decarboxylase; silverDB:etchr00447.
       0.468
ETA_33150
Putative transcriptional regulator; silverDB:etchr03301.
  
     0.450
soxS
Regulatory protein SoxS; silverDB:etchr03066.
  
   
 0.424
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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