Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yghAPutative oxidoreductase YghA; silverDB:etchr00453. (297 aa)    
Predicted Functional Partners:
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
  
 
 0.939
ETA_13580
8-amino-7-oxononanoate synthase; silverDB:etchr01348.
  
 
 0.775
nuoC
NADH dehydrogenase I C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
   0.696
fabD
Malonyl CoA-acyl carrier protein transacylase (MCT); silverDB:etchr02012.
 
 
 0.507
csuE
CsuE protein (chaperone-usher pili assembly system), hypothetical secreted protein; silverDB:etchr00454.
     
 0.501
csuB
CsuB protein (chaperone-usher pili assembly system); silverDB:etchr00457.
     
 0.472
acpP
Probable acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
 
 0.431
csuD
CsuD protein (chaperone-usher pili assembly system), similar to fimbrial usher proteins; silverDB:etchr00455.
       0.423
csuC
CsuC protein, similar to fimbrial chaperone proteins (chaperone-usher pili assembly system); silverDB:etchr00456.
       0.423
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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