Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acrTonB-dependent ferric achromobactin receptor; silverDB:etchr00468. (724 aa)    
Predicted Functional Partners:
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
 
  
 0.802
fecR
Iron(III) dicitrate sensor protein FecR; silverDB:etchr03021.
 
 
 0.704
tonB
Periplasmic protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
 
 0.616
ETA_13970
Predicted transcription regulator containing HTH domain; silverDB:etchr01387.
  
     0.446
outK
General secretion pathway protein K; silverDB:etchr00776.
  
     0.406
csuD
CsuD protein (chaperone-usher pili assembly system), similar to fimbrial usher proteins; silverDB:etchr00455.
  
     0.403
fhuA
Ferrichrome iron receptor; silverDB:etchr00866.
  
  
0.401
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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