Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ampRAmpR transcriptional regulator; silverDB:etchr00507; Belongs to the LysR transcriptional regulatory family. (299 aa)    
Predicted Functional Partners:
ampD
N-acetylmuramyl L-alanine amydase; silverDB:etchr00797.
      
 0.745
ETA_17970
Putative transcriptional regulator, LysR; silverDB:etchr01786; Belongs to the LysR transcriptional regulatory family.
  
     0.683
ampC
Beta-lactamase precursor; silverDB:etchr00508.
     
 0.666
ETA_04380
LysR-family transcriptional regulator; silverDB:etchr00438; Belongs to the LysR transcriptional regulatory family.
  
     0.605
budR
HTH-type transcriptional regulator BudR (Bud operon transcriptional regulator); silverDB:etchr00010; Belongs to the LysR transcriptional regulatory family.
  
     0.518
hdfR
HTH-type transcriptional regulator HdfR; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon.
  
     0.491
ETA_01250
Regulatory protein, LysR; silverDB:etchr00124; Belongs to the LysR transcriptional regulatory family.
  
     0.449
ETA_24130
Regulatory protein LysR family (substrate-binding); silverDB:etchr02401; Belongs to the LysR transcriptional regulatory family.
  
     0.442
hexS
LysR-family transcriptional regulator; silverDB:etchr01194; Belongs to the LysR transcriptional regulatory family.
  
     0.424
ETA_12860
LysR-family transcriptional regulatory protein; silverDB:etchr01276; Belongs to the LysR transcriptional regulatory family.
  
     0.414
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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