Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ETA_05690Probable capsid portal protein; silverDB:etchr00564. (351 aa)    
Predicted Functional Partners:
ETA_05700
Terminase, ATPase subunit; silverDB:etchr00565.
 
    0.996
ETA_05710
Putative capsid scaffolding protein; silverDB:etchr00566.
 
    0.993
ETA_05720
Putative major capsid protein; silverDB:etchr00567.
 
  
 0.993
ETA_05730
Putative phage terminase; silverDB:etchr00568.
 
    0.991
ETA_05740
Putative capsid completion protein; silverDB:etchr00569.
 
    0.991
ETA_05800
Putative phage tail protein; silverDB:etchr00575.
 
    0.989
ETA_05810
Putative phage tail completion protein; silverDB:etchr00576.
 
    0.988
ETA_05830
Phage baseplate assembly protein; silverDB:etchr00578.
 
    0.987
ETA_05930
Putative phage tail protein; silverDB:etchr00588.
 
    0.986
ETA_05900
Putative phage tail protein E; silverDB:etchr00585.
 
    0.984
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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