Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ETA_05910Prophage protein P2 GpE; silverDB:etchr00586. (39 aa)    
Predicted Functional Partners:
ETA_05900
Putative phage tail protein E; silverDB:etchr00585.
  
    0.544
ETA_05930
Putative phage tail protein; silverDB:etchr00588.
  
    0.515
ETA_05720
Putative major capsid protein; silverDB:etchr00567.
   
    0.466
ETA_05740
Putative capsid completion protein; silverDB:etchr00569.
  
    0.463
ETA_05830
Phage baseplate assembly protein; silverDB:etchr00578.
  
    0.459
ETA_05690
Probable capsid portal protein; silverDB:etchr00564.
   
    0.447
ETA_05710
Putative capsid scaffolding protein; silverDB:etchr00566.
   
    0.447
ETA_05800
Putative phage tail protein; silverDB:etchr00575.
  
    0.425
ETA_05620
Putative methylase, fragment; silverDB:etchr00559.
   
    0.421
ETA_05750
Putative phage tail protein; silverDB:etchr00570.
  
    0.414
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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