Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rlsBLevansucrase regulator; silverDB:etchr10008. (72 aa)    
Predicted Functional Partners:
ETA_05930
Putative phage tail protein; silverDB:etchr00588.
  
    0.873
ETA_05940
Bacteriophage P2 gpD protein; silverDB:etchr00589.
  
    0.773
ETA_05920
Probable bacteriophage V tail protein; silverDB:etchr00587.
  
    0.711
ETA_05830
Phage baseplate assembly protein; silverDB:etchr00578.
  
    0.679
ETA_05710
Putative capsid scaffolding protein; silverDB:etchr00566.
  
    0.660
ETA_05900
Putative phage tail protein E; silverDB:etchr00585.
  
    0.656
ETA_05800
Putative phage tail protein; silverDB:etchr00575.
  
    0.643
ETA_05810
Putative phage tail completion protein; silverDB:etchr00576.
  
    0.635
ETA_05720
Putative major capsid protein; silverDB:etchr00567.
  
    0.620
ETA_05620
Putative methylase, fragment; silverDB:etchr00559.
   
    0.600
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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