Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ETA_05970Conserved hypothetical protein; silverDB:etchr00590. (198 aa)    
Predicted Functional Partners:
bscS
Cellulose synthase operon protein C; silverDB:etchr03376.
 
    0.593
ETA_19380
Conserved hypothetical protein; silverDB:etchr01927.
 
     0.580
ETA_09420
Hypothetical protein; silverDB:etchr00933.
  
     0.573
bscD
Cellulose synthase operon protein D; silverDB:etchr03375.
  
     0.475
tir
Transfer inhibition protein Tir; silverDB:etchr02560.
 
    0.464
ETA_03080
Glutamate synthase (NADPH); silverDB:etchr00307.
 
   
 0.452
wssA
Cellulose biosynthesis protein; silverDB:etchr03379.
  
     0.444
ETA_25710
Hypothetical protein; silverDB:etchr02559.
  
     0.440
ETA_17360
TonB-dependent haemoglobin/transferrin/lactoferrin receptor; silverDB:etchr01725.
  
     0.437
ETA_22400
Conserved hypothetical protein; silverDB:etchr02228.
  
     0.429
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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