STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_06110Putative lipoprotein; silverDB:etchr00604. (172 aa)    
Predicted Functional Partners:
ETA_06120
Conserved hypothetical protein; silverDB:etchr00605.
 
  
 0.977
ETA_18630
OmpA family protein; silverDB:etchr01852.
 
  
 0.977
ETA_06130
OmpA family protein; silverDB:etchr00606.
 
  
 0.964
ETA_06150
Conserved hypothetical protein; silverDB:etchr00608.
 
  
 0.948
ETA_06140
Putative membrane protein; silverDB:etchr00607.
 
  
 0.947
ETA_06160
Conserved hypothetical protein; silverDB:etchr00609.
 
  
 0.941
ETA_06170
Conserved hypothetical protein; silverDB:etchr00610.
 
  
 0.930
ETA_06180
Conserved hypothetical protein; silverDB:etchr00611.
 
  
 0.910
ETA_06300
Conserved hypothetical protein; silverDB:etchr00622.
 
  
 0.889
ETA_06200
Conserved hypothetical protein; silverDB:etchr00613.
 
  
 0.885
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.