STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_06830Putative ABC transport ATP-binding subunit; silverDB:etchr00675. (263 aa)    
Predicted Functional Partners:
ETA_06840
Putative branched-chain amino acid transport system, permease component; silverDB:etchr00676; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
ETA_06850
Putative branched-chain amino acid transport system, permease component; silverDB:etchr00677; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
ETA_06860
Putative substrate-binding periplasmic transport protein; silverDB:etchr00678.
 
  
 0.994
ETA_06820
Putative ABC transport ATP-binding subunit; silverDB:etchr00674.
 
 
0.981
uahA
Urea amidolyase; silverDB:etchr00680.
 
   
 0.872
ETA_22620
Putative amino acid transporter; silverDB:etchr02250.
 
  
 
0.854
livM
High-affinity branched-chain amino acid transport system permease protein; silverDB:etchr03256; Belongs to the binding-protein-dependent transport system permease family.
  
 0.843
ETA_06870
GntR-family transcriptional regulator; silverDB:etchr00679.
 
     0.840
ETA_06890
Probable amidase; silverDB:etchr00681.
 
     0.726
deoR
Deoxyribose operon repressor; silverDB:etchr00673.
       0.514
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.