Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
arcATwo-component system, OmpR family, aerobic respiration control protein ArcA; silverDB:etchr00688. (238 aa)    
Predicted Functional Partners:
arcB
Aerobic respiration control sensor protein ArcB; silverDB:etchr00308.
 
 0.995
barA
Signal transduction histidine-protein kinase BarA; silverDB:etchr02713.
 
 
 0.922
cpxA
Sensory kinase in two-component regulatory system with CpxR; silverDB:etchr00093.
 
 
 0.777
envZ
Osmolarity sensor protein; silverDB:etchr03204.
 
 
 0.750
nuoC
NADH dehydrogenase I C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
  
   0.708
tRNA-Arg
tRNA-Arg; tRNAscan-SE-score 69.56.
 
 
 0.705
phoR
Phosphate regulon histidine kinase; silverDB:etchr02535.
 
 
 0.645
pmrB
Two-component system sensor protein; silverDB:etchr00334.
 
 
 0.601
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
  
  
 0.593
ETA_12580
Hypothetical protein; silverDB:etchr01249; Belongs to the UPF0352 family.
  
     0.570
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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