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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_08040Conserved hypothetical protein; silverDB:etchr00795. (182 aa)    
Predicted Functional Partners:
ETA_08050
Putative transcriptional regulator protein, LysR family; silverDB:etchr00796; Belongs to the LysR transcriptional regulatory family.
 
     0.667
nadC
Nicotinate-nucleotide pyrophosphorylase; silverDB:etchr00794; Belongs to the NadC/ModD family.
       0.579
ETA_15700
Hypothetical protein; silverDB:etchr01560.
  
     0.540
ETA_27080
Conserved hypothetical protein; silverDB:etchr02696.
  
     0.505
ETA_00510
Conserved hypothetical protein; silverDB:etchr00051.
  
     0.504
xnp2
Similar to Nematicidal protein 2; silverDB:etchr00547.
  
     0.503
rhsA
Nematicidal protein; silverDB:etchr03010.
  
     0.497
cs1
Clavaminate synthase 1; silverDB:etchr02807.
  
     0.481
ETA_22690
Conserved hypothetical protein; silverDB:etchr02257.
  
    0.417
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.