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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETA_08050Putative transcriptional regulator protein, LysR family; silverDB:etchr00796; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
lysR-2
Transcriptional activator protein LysR; silverDB:etchr02767; Belongs to the LysR transcriptional regulatory family.
  
     0.741
ETA_15530
Transcriptional regulator, LysR family; silverDB:etchr01543; Belongs to the LysR transcriptional regulatory family.
  
     0.730
ynfL
Putative transcriptional regulator, LysR family; silverDB:etchr01748; Belongs to the LysR transcriptional regulatory family.
  
     0.726
ETA_33420
Putative transcriptional regulator; silverDB:etchr03328; Belongs to the LysR transcriptional regulatory family.
  
     0.706
ETA_08040
Conserved hypothetical protein; silverDB:etchr00795.
 
     0.667
lysR
Transcriptional regulator; silverDB:etchr02390; Belongs to the LysR transcriptional regulatory family.
  
     0.643
ETA_24130
Regulatory protein LysR family (substrate-binding); silverDB:etchr02401; Belongs to the LysR transcriptional regulatory family.
  
     0.642
ETA_30530
Transcriptional regulator, LysR family; silverDB:etchr03040; Belongs to the LysR transcriptional regulatory family.
  
     0.632
ETA_17320
LysR-family transcriptional regulator; silverDB:etchr01721; Belongs to the LysR transcriptional regulatory family.
  
     0.618
ETA_16300
LysR-family transcriptional regulator; silverDB:etchr01620; Belongs to the LysR transcriptional regulatory family.
  
     0.591
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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