STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ampEAmpE protein (Putative transmembrane protein); silverDB:etchr00798. (284 aa)    
Predicted Functional Partners:
ampD
N-acetylmuramyl L-alanine amydase; silverDB:etchr00797.
     
 0.883
ygaC
Putative cytoplasmic protein; silverDB:etchr00932.
  
     0.766
ypfN
Conserved hypothetical protein YpfN; silverDB:etchr01062.
  
     0.764
mukF-2
MukF protein (Killing factor KicB); silverDB:etchr02123.
  
     0.759
yjbO
Similar to conserved hypothetical protein YjbO, probable fragment; silverDB:etchr03083.
  
     0.753
bssS
Biofilm regulator; silverDB:etchr02042.
  
     0.752
aaeX
Protein AaeX; silverDB:etchr00291.
  
     0.749
ynfB
Conserved hypothetical protein YnfB; silverDB:etchr01741; Belongs to the UPF0482 family.
  
     0.749
yeeA
Putative inner membrane protein YeeA; silverDB:etchr01354.
  
     0.727
yhfK
Putative inner membrane protein YhfK; silverDB:etchr03177.
  
     0.723
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.