Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ETA_08110Putative membrane protein; silverDB:etchr00802. (471 aa)    
Predicted Functional Partners:
ETA_08100
Putative glycosyl hydrolase; silverDB:etchr00801; Belongs to the glycosyl hydrolase 43 family.
  
 0.926
cpsJ
Exopolysaccharide biosynthesis protein; silverDB:etchr01320.
  
     0.595
aroP
Aromatic amino acid transport protein; silverDB:etchr00803.
       0.577
ETA_22350
Conserved hypothetical protein; silverDB:etchr02223.
  
  
 0.518
ETA_16900
Putative carboxylesterase; silverDB:etchr01680; Belongs to the type-B carboxylesterase/lipase family.
 
   
 0.469
cpsL
Exopolysaccharide biosynthesis protein; silverDB:etchr01322.
  
     0.454
yegE
Putative sensor-type protein YegE; silverDB:etchr01305.
 
     0.444
rcsA
Colanic acid capsular biosynthesis activation protein A; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds to DNA to regulate expression of genes.
  
     0.429
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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