Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cbiOCobalt import ATP-binding protein CbiO; silverDB:etchr00809. (224 aa)    
Predicted Functional Partners:
ETA_08190
Cobalt transport protein; silverDB:etchr00810.
 
 0.998
ETA_08200
Similar to biotin synthase; silverDB:etchr00811.
 
 
 0.997
cylG
3-oxoacyl-[acyl-carrier protein] reductase; silverDB:etchr00808; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.806
lpdA
Pyruvate dehydrogenase multienzyme complex, Dihydrolipoamide dehydrogenase component; silverDB:etchr00807.
     
 0.599
truA
tRNA pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.597
birA
Bifunctional protein: biotin operon repressor and biotin-[acetyl-CoA carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
 
    0.540
ETA_03710
Putative permease; silverDB:etchr00371.
     
  0.540
yjgQ
Inner membrane protein; silverDB:etchr00372.
     
  0.540
proW
Glycine betaine/L-proline transport system permease protein; silverDB:etchr00925.
     
  0.540
ugpC
SN-glycerol-3-phosphate transport ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
     
 
0.540
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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