Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yacLConserved hypothetical protein YacL; silverDB:etchr00820; Belongs to the UPF0231 family. (120 aa)    
Predicted Functional Partners:
ETA_20510
Putative lipoprotein (DUF1439); silverDB:etchr02039.
  
     0.741
yijD
Putative inner membrane protein; silverDB:etchr00141.
  
     0.737
yniB
Hypothetical protein YniB; silverDB:etchr01834.
  
     0.725
trpR
Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region.
  
     0.708
ETA_15280
Conserved hypothetical protein; silverDB:etchr01518; Belongs to the UPF0181 family.
  
     0.707
ycdY
Conserved hypothetical protein YcdY; silverDB:etchr01433.
  
     0.705
ETA_28430
Putative exported protein; silverDB:etchr02831.
  
     0.700
yfeY-2
Conserved hypothetical protein YfeY; silverDB:etchr01080.
  
     0.694
crp
Catabolite gene activator (cAMP receptor protein); silverDB:etchr03176.
    
   0.632
rcsF
Regulator in colanic acid synthesis; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family.
  
     0.607
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.