Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ETA_09100Cytochrome precursor; silverDB:etchr00901. (104 aa)    
Predicted Functional Partners:
ETA_30590
Gluconate 2-dehydrogenase cytochrome c subunit; silverDB:etchr03046.
 
 
 0.873
tilS
tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
       0.724
ETA_27760
Biotin sulfoxide reductase; silverDB:etchr02764; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 
 0.587
nasA
Nitrate reductase; silverDB:etchr01707; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
 
 0.580
yaeR
Conserved hypothetical protein YaeR; silverDB:etchr00899.
       0.560
ccmI
Putative cytochrome c-type biogenesis protein; silverDB:etchr01136.
  
   
 0.525
ETA_16290
Putative molybdopterin oxidoreductase; silverDB:etchr01619; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.510
cadA
Lysine decarboxylase; silverDB:etchr00898.
       0.490
ccmC
Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
   
 0.404
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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