Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rofRho-binding antiterminator protein; silverDB:etchr00902. (87 aa)    
Predicted Functional Partners:
ydbH
Hypothetical protein YdbH; silverDB:etchr01650.
  
     0.770
asmA
AsmA suppressor of OmpF assembly mutants; silverDB:etchr01309.
 
     0.765
yojN
Putative sensor kinase in regulatory system; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.
  
     0.763
smp
Putative membrane protein; silverDB:etchr00663.
  
     0.761
helD
Helicase IV; silverDB:etchr02086.
  
     0.756
lpoB
Putative lipoprotein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family.
  
   
 0.755
ETA_28430
Putative exported protein; silverDB:etchr02831.
  
     0.755
holD
DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.
  
     0.753
yfeY-2
Conserved hypothetical protein YfeY; silverDB:etchr01080.
  
     0.751
ETA_17640
Conserved hypothetical protein; silverDB:etchr01753.
  
     0.750
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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