Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
spoU-2Predicted tRNA/rRNA methyltransferase; silverDB:etchr00919; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (344 aa)    
Predicted Functional Partners:
yicH
Conserved hypothetical protein YicH; silverDB:etchr00037.
  
     0.710
ydbH
Hypothetical protein YdbH; silverDB:etchr01650.
  
     0.677
dsbA
Thiol:disulfide interchange protein DsbA; silverDB:etchr00023.
 
     0.657
phoQ
Virulence sensor histidine kinase; silverDB:etchr01960.
  
 
   0.644
yhcB
Putative periplasmic protein; silverDB:etchr00300.
  
     0.627
helD
Helicase IV; silverDB:etchr02086.
  
     0.625
rof
Rho-binding antiterminator protein; silverDB:etchr00902.
  
     0.621
trxC
Thioredoxin 2; silverDB:etchr00918; Belongs to the thioredoxin family.
       0.621
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
 
 
 0.609
ftsN
Cell division protein; Essential cell division protein that activates septal peptidoglycan synthesis and constriction of the cell. Acts on both sides of the membrane, via interaction with FtsA in the cytoplasm and interaction with the FtsQBL complex in the periplasm. These interactions may induce a conformational switch in both FtsA and FtsQBL, leading to septal peptidoglycan synthesis by FtsI and associated synthases.
  
     0.593
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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