STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrBMultidrug resistance protein B; silverDB:etchr00920; Belongs to the major facilitator superfamily. (511 aa)    
Predicted Functional Partners:
emrA
Multidrug resistance secretion protein A; silverDB:etchr00921.
 
 
 0.975
emrK
Putative multidrug resistance protein K; silverDB:etchr02189.
  
     0.707
ETA_20690
HlyD family secretion protein; silverDB:etchr02057.
 
     0.699
emrR
Transcriptional repressor Mpra (Protein EmrR); silverDB:etchr00922.
 
   
 0.626
aaeA
P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux pump protein A); Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.610
ydhJ
Conserved hypothetical protein YdhJ; silverDB:etchr01782; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.504
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
  
  
 0.490
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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