STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
proXGlycine betaine-binding periplasmic protein; silverDB:etchr00924. (331 aa)    
Predicted Functional Partners:
proW
Glycine betaine/L-proline transport system permease protein; silverDB:etchr00925.
 
 0.999
proV
Glycine betaine/L-proline transport ATP-binding protein ProV; silverDB:etchr00926.
 
 0.999
proP7
Probable sugar transporter; silverDB:etchr00923.
       0.679
mtlR
Mannitol operon repressor; silverDB:etchr03406.
  
     0.520
yrbE
ABC transporter, permease subunit, probable toluene tolerance protein; silverDB:etchr00322.
     
 0.453
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.439
nrdF
Ribonucleoside-diphosphate reductase 2, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
       0.436
hisQ
Histidine transport system permease protein; silverDB:etchr01172.
  
  
  0.436
adhE
Aldehyde-alcohol dehydrogenase; silverDB:etchr01571; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.403
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.