STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
expRTranscriptional activator protein; silverDB:etchr00943. (240 aa)    
Predicted Functional Partners:
expI
Acylhomoserine lactone synthase; silverDB:etchr00944.
  
  
 0.981
marT-2
Putative transcriptional regulator; silverDB:etchr00388.
  
     0.608
ibpA
Small heat shock protein IbpA (16 kDa heat shock protein A); Associates with aggregated proteins, together with IbpB, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress. Aggregated proteins bound to the IbpAB complex are more efficiently refolded and reactivated by the ATP-dependent chaperone systems ClpB and DnaK/DnaJ/GrpE. Its activity is ATP-independent.
  
 
 
 0.586
bacA
Similar to bacitracin synthetase 1 (BA1), protein contains non-ribosomal peptide synthetase modules; silverDB:etchr02904.
 
  
 0.546
phzI
Autoinducer synthase; silverDB:etchr02069.
      
 0.508
barA
Signal transduction histidine-protein kinase BarA; silverDB:etchr02713.
  
   
 0.501
yqjB
Putative outer membrane protein, YqjB; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.475
arcB
Aerobic respiration control sensor protein ArcB; silverDB:etchr00308.
  
   
 0.466
ETA_07620
Conserved hypothetical protein; silverDB:etchr00753.
  
     0.426
sdiA
Regulatory protein; silverDB:etchr02070.
  
   
0.416
Your Current Organism:
Erwinia tasmaniensis
NCBI taxonomy Id: 465817
Other names: E. tasmaniensis Et1/99, Erwinia tasmaniensis Et1/99, Erwinia tasmaniensis str. Et1/99, Erwinia tasmaniensis strain Et1/99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.